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Commit 9d661f5c authored by tjc's avatar tjc
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VCF insertion colour is magenta

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@15890 ee4ac58c-ac51-4696-9907-e4b3aa274f04
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...@@ -46,7 +46,7 @@ G blue, A green, C red. There are options available to filter the display by the ...@@ -46,7 +46,7 @@ G blue, A green, C red. There are options available to filter the display by the
types of variants. Right clicking on the VCF panel will display a pop-up menu in which types of variants. Right clicking on the VCF panel will display a pop-up menu in which
there is a 'Filter...' menu. This opens a window with check boxes for a number of varaint types and properties that can there is a 'Filter...' menu. This opens a window with check boxes for a number of varaint types and properties that can
be used to filter on. This can be used to show and hide synonymous, non-synonymous, deletion (grey), be used to filter on. This can be used to show and hide synonymous, non-synonymous, deletion (grey),
insertion (yellow), and multiple allele (orange line with a circle at the top) insertion (magenta), and multiple allele (orange line with a circle at the top)
variants. In this window there is a check box to hide the variants that do not overlap CDS features. variants. In this window there is a check box to hide the variants that do not overlap CDS features.
There is an option to mark variants that introduce stop codons (into the CDS There is an option to mark variants that introduce stop codons (into the CDS
features) with a circle in the middle of the line that represents the variant. There are also options features) with a circle in the middle of the line that represents the variant. There are also options
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