add option for read/write polypeptide domains

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11839 ee4ac58c-ac51-4696-9907-e4b3aa274f04

docs/chado/writedb_entry.html

@@ -60,6 +60,8 @@ The 'script' mode is for batch runs where you don't want any user prompting. Pas
 	
 	<dt>-a</dt>	<dd>[y|n] for EMBL submission format change to n, default is y</dd>
 	
+	<dt>-pp</dt> <dd>[y|n] read polypeptide domain features, default is n</dd>
+	
 	<dt>-c</dt>	<dd>the URL for your Chado database e.g. db.genedb.org:5432/snapshot?genedb_ro (you can also do this by using the -Dchado=... method, but this -c parameter will override that) </dd>
 	
 	<dt>-u</dt>	<dd>[swing|console|script] the UI mode : run in swing (with popup dialog boxes) mode, run in console mode (choices entered in the console window), or in script mode (all choices default to continue, all parameters passed on command line) </dd>