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Commit e632e27a authored by tcarver's avatar tcarver
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check to ensure not recursively trying to read from the same file

parent b0cc9a15
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......@@ -479,7 +479,7 @@ class UserDefinedQualifiers extends JFrame
*/
private QualifierVector loadQualifiers(final Document doc) throws IOException
{
QualifierVector qualifiers = loadObo(doc.getInputStream());
QualifierVector qualifiers = loadObo(doc);
if(qualifiers.size() == 0)
qualifiers = loadText(doc.getInputStream());
return qualifiers;
......@@ -489,11 +489,12 @@ class UserDefinedQualifiers extends JFrame
* Load in qualifiers from an input stream that are in OBO format.
* @param ins
* @return
* @throws IOException
*/
private QualifierVector loadObo(final InputStream ins)
private QualifierVector loadObo(final Document doc) throws IOException
{
final LinePushBackReader reader = new LinePushBackReader(
new BufferedReader(new InputStreamReader(ins)));
new BufferedReader(new InputStreamReader(doc.getInputStream())));
final QualifierVector qualifiers = new QualifierVector();
try
{
......@@ -539,8 +540,11 @@ class UserDefinedQualifiers extends JFrame
else if(line.startsWith("import:"))
{
// import OBO file from a URL
final URL url = new URL(line.substring(7).trim());
createObo(new URLDocument(url));
final URLDocument urlDoc = new URLDocument(
new URL(line.substring(7).trim()) );
// check to ensure not recursively reading from same file
if(!doc.getLocation().equals(urlDoc.getLocation()))
createObo(urlDoc);
}
}
reader.close();
......
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