refactor for read count and rpkm calculations (ee5910a1) · Commits · violethaze74 / Artemis · GitLab

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ee5910a1

Commit ee5910a1 authored 11 years ago by tcarver

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refactor for read count and rpkm calculations

parent 64c93760

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uk/ac/sanger/artemis/components/alignment/BamUtils.java 172 additions, 36 deletions

uk/ac/sanger/artemis/components/alignment/BamUtils.java
uk/ac/sanger/artemis/components/alignment/BamView.java 25 additions, 12 deletions

uk/ac/sanger/artemis/components/alignment/BamView.java
uk/ac/sanger/artemis/components/alignment/MappedReads.java 77 additions, 282 deletions

uk/ac/sanger/artemis/components/alignment/MappedReads.java
uk/ac/sanger/artemis/components/alignment/ReadCount.java 40 additions, 0 deletions

uk/ac/sanger/artemis/components/alignment/ReadCount.java
uk/ac/sanger/artemis/components/alignment/ReadCountDialog.java 5 additions, 2 deletions

.../sanger/artemis/components/alignment/ReadCountDialog.java

with 319 additions and 332 deletions

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