Commits · 2cb2fe3e48333a15057e7a7521a2cf5408587c5b · violethaze74 / Artemis

Feb 12, 2014
- fix for writing GFF qualifiers and stripping out current= · 2cb2fe3e
  tcarver authored 11 years ago
  
  2cb2fe3e
Jan 31, 2014
- update · 75b1d23f
  tcarver authored 11 years ago
  
  75b1d23f
- add the ability to find features contained by ranges defined by selected · e930678a
  tcarver authored 11 years ago
  
  features as well as selected base ranges
  e930678a
- use reserved attribute list in GFF3AttributeBuilder.reserved_a · 1d18975c
  tcarver authored 11 years ago
  
  1d18975c
- ignore attributes with null values · f7420c9c
  tcarver authored 11 years ago
  
  f7420c9c
Jan 30, 2014
- Merge pull request #3 from satta/gff · c3f70910
  tcarver authored 11 years ago
  
  Changes in GFF3 export
  c3f70910
Jan 29, 2014
- make aggregators tied to pre-mapping keys take precedence · e5f78e93
  Sascha Steinbiss authored 11 years ago
  
  e5f78e93
- remove obsolete comment · b0bac02d
  Sascha Steinbiss authored 11 years ago
  
  b0bac02d
- add tests for GFF3AttributeBuilder · a0f30e21
  Sascha Steinbiss authored 11 years ago
  
  a0f30e21
- add test for GFF3Encoder · 1d9be926
  Sascha Steinbiss authored 11 years ago
  
  1d9be926
- make mapped character list public · ff75a69d
  Sascha Steinbiss authored 11 years ago
  
  ff75a69d
- rework GFF3 export code · e4b54525
  Sascha Steinbiss authored 11 years ago
  
  e4b54525
- update · a3ba6214
  tcarver authored 11 years ago
  
  a3ba6214
- Merge pull request #181 from tcarver/master · 2b4b0884
  tcarver authored 11 years ago
  
  misc
  2b4b0884
- update · 2119c872
  tcarver authored 11 years ago
  
  2119c872
Jan 24, 2014
- add option to define a cut-off · 5f9aef28
  tcarver authored 11 years ago
  
  5f9aef28
- use new drawMax() for coverage plot · de7b3227
  tcarver authored 11 years ago
  
  de7b3227
- add drawMax(Graphics2D g2, float max) · ac54e62b
  tcarver authored 11 years ago
  
  ac54e62b
Jan 22, 2014
- Merge pull request #180 from tcarver/master · 426b64d2
  tcarver authored 11 years ago
  
  use uniprot.org for protein links
  426b64d2
- use uniprot.org for protein links · 5cd710ca
  tcarver authored 11 years ago
  
  5cd710ca
- Merge pull request #179 from tcarver/master · f24ff66d
  tcarver authored 11 years ago
  
  misc
  f24ff66d
- update srs server · 44cccb8a
  tcarver authored 11 years ago
  
  44cccb8a
- update · 96fe31e3
  tcarver authored 11 years ago
  
  96fe31e3
- Merge pull request #178 from tcarver/master · 7efd07eb
  tcarver authored 11 years ago
  
  misc
  7efd07eb
- add lines to find firefox if no other browser found · c7b06757
  tcarver authored 11 years ago
  
  c7b06757
- change srs server · 047dcecf
  tcarver authored 11 years ago
  
  047dcecf
Jan 20, 2014
- Merge pull request #177 from tcarver/master · 9390eb8c
  tcarver authored 11 years ago
  
  misc
  9390eb8c
- add comment to protein when splitting gene models · 67c34aa9
  tcarver authored 11 years ago
  
  67c34aa9
Jan 17, 2014
- changes to start_codons_5 · aa4218c7
  tcarver authored 11 years ago
  
  aa4218c7
- update · 047e013b
  tcarver authored 11 years ago
  
  047e013b
- add comment to the gene when splitting to note the previous ID · 682aff02
  tcarver authored 11 years ago
  
  682aff02
- add comment qualifier to gene key · 1bf9b12d
  tcarver authored 11 years ago
  
  1bf9b12d
Jan 14, 2014
- Merge pull request #175 from satta/filter_qualifiers · 6d88f368
  tcarver authored 11 years ago
  
  allow to exclude attributes from GFF3 output
  v16.0.0
  
  6d88f368
- Merge pull request #176 from tcarver/master · f567d6d5
  tcarver authored 11 years ago
  
  misc
  f567d6d5
- introduce separate log scale option for coverage plots · d0bc6843
  tcarver authored 11 years ago
  
  d0bc6843
- allow to exclude attributes from GFF3 output · 0179a734
  Sascha Steinbiss authored 11 years ago
  
  0179a734
- update · 72c86a6f
  tcarver authored 11 years ago
  
  72c86a6f
Jan 13, 2014
- Merge pull request #174 from satta/master · b8c708b9
  tcarver authored 11 years ago
  
  do not output empty GFF3 attributes
  b8c708b9
- Merge pull request #173 from tcarver/master · aae87c49
  tcarver authored 11 years ago
  
  misc
  aae87c49
- update · 6f1b79ad
  tcarver authored 11 years ago
  
  6f1b79ad

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