Commits · 7433ee35f9b6ac934872a4e2a5dfc1c40de83e1b · violethaze74 / Artemis

Oct 24, 2013
- change EMBL hyperlink · 7433ee35
  tcarver authored 11 years ago
  
  7433ee35
Sep 10, 2013
- add fasta_record to extra_keys_gff · 58c1b5ea
  tcarver authored 11 years ago
  
  58c1b5ea
Aug 15, 2013
- remove isFminPartial / isFmaxPartial · 26ecef99
  tcarver authored 11 years ago
  
  26ecef99
Jun 12, 2013
- add automatic_history_annotation flag · 5112bf66
  tcarver authored 11 years ago
  
  5112bf66
Apr 10, 2013
- change interpro url · 6d59ea00
  tcarver authored 11 years ago
  
  6d59ea00
Sep 12, 2012
- change to using /pseudogene qualifier · cb71fdef
  tcarver authored 12 years ago
  
  cb71fdef
Sep 07, 2012
- add BamView options · 21f57421
  tcarver authored 12 years ago
  
  21f57421
Jul 27, 2012
- remove lookseq options · f65240bb
  tcarver authored 12 years ago
  
  f65240bb
Jun 13, 2012
- add GI to the hyperlinks list · 47844a85
  tcarver authored 12 years ago
  
  47844a85
Apr 24, 2012
- add overview_feature_stack_view option · 9336390b
  tcarver authored 12 years ago
  
  9336390b
Apr 23, 2012
- update BLAST databases · 242441d3
  tcarver authored 12 years ago
  
  242441d3
Jan 20, 2012
- new translation code · 9606df46
  tcarver authored 13 years ago
  
  9606df46
Jan 19, 2012
- add to extra_keys_gff · 49820d74
  tcarver authored 13 years ago
  
  49820d74
Oct 03, 2011
- updated GO link · ce30a83e
  tcarver authored 13 years ago
  
  ce30a83e
Sep 07, 2011
- shortcut changed in Preferences are saved between sessions · 33f05a9a
  tcarver authored 13 years ago
  
  33f05a9a
Jul 19, 2010

tjc authored 14 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@14254 ee4ac58c-ac51-4696-9907-e4b3aa274f04

01da83b1

Jun 29, 2010

add to invisible_qualifiers_gff · 0079ee51

tjc authored 14 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@14123 ee4ac58c-ac51-4696-9907-e4b3aa274f04

0079ee51

May 24, 2010

add show_forward_lines and show_reverse_lines as options · e0176b85

tjc authored 14 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13897 ee4ac58c-ac51-4696-9907-e4b3aa274f04

e0176b85

May 18, 2010

add to sequence file suffixes · 3362d747

tjc authored 14 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13856 ee4ac58c-ac51-4696-9907-e4b3aa274f04

3362d747

Feb 25, 2010

add history qualifiers to allowed GFF qualifiers · 894def36

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13337 ee4ac58c-ac51-4696-9907-e4b3aa274f04

894def36

Feb 24, 2010

add private_cvname flag to indicate a cv used to store private fields · bcb38325

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@13320 ee4ac58c-ac51-4696-9907-e4b3aa274f04

bcb38325

Dec 01, 2009

add fasta and fa to sequence_file_suffixes · dd248274

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@12510 ee4ac58c-ac51-4696-9907-e4b3aa274f04

dd248274

Nov 26, 2009

add literature qualifier · f1dac945

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@12443 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f1dac945

Nov 12, 2009

add product_synonym as an extra qualifier · cc43e38a

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@12333 ee4ac58c-ac51-4696-9907-e4b3aa274f04

cc43e38a

Aug 06, 2009

add rfam hyperlink · 66e4aa0f

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11507 ee4ac58c-ac51-4696-9907-e4b3aa274f04

66e4aa0f

Jul 13, 2009

add previous_systematic_id as allowed qualifier · eb6220dd

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11346 ee4ac58c-ac51-4696-9907-e4b3aa274f04

eb6220dd

Jul 03, 2009

add GeneID · fda47edc

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11298 ee4ac58c-ac51-4696-9907-e4b3aa274f04

fda47edc

Jun 30, 2009

add isFminPartial and isFmaxPartial to the extra gff qualifier list · 1d60d2aa

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11236 ee4ac58c-ac51-4696-9907-e4b3aa274f04

1d60d2aa

Jun 22, 2009

change chado_infer_CDS_UTR to no · 587d2870

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11157 ee4ac58c-ac51-4696-9907-e4b3aa274f04

587d2870

Jun 19, 2009

change to chado_infer_CDS_UTR · 0517c717

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11155 ee4ac58c-ac51-4696-9907-e4b3aa274f04

0517c717

Jun 12, 2009
- add chado_infer_CDS option for inferring CDS and UTR features from the database gene model · 251e6e33
  tjc authored 15 years ago
  
  git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11036 ee4ac58c-ac51-4696-9907-e4b3aa274f04
  251e6e33
May 26, 2009

add hyperling to AID · 6a48efe8

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10899 ee4ac58c-ac51-4696-9907-e4b3aa274f04

6a48efe8

May 15, 2009

update ncbi url · 79325440

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10831 ee4ac58c-ac51-4696-9907-e4b3aa274f04

79325440

Apr 21, 2009

add PDB hyperlink · 50628355

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10568 ee4ac58c-ac51-4696-9907-e4b3aa274f04

50628355

Apr 20, 2009

add product_cvname and synonym_cvname to the options file · c03d396b

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10550 ee4ac58c-ac51-4696-9907-e4b3aa274f04

c03d396b

Apr 08, 2009

comment out lookseq · ea138d36

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10457 ee4ac58c-ac51-4696-9907-e4b3aa274f04

ea138d36

add lookseq_chr and lookseq_lane · 528beb7a

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10456 ee4ac58c-ac51-4696-9907-e4b3aa274f04

528beb7a

add lookseq url option · 3d200b8d

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10451 ee4ac58c-ac51-4696-9907-e4b3aa274f04

3d200b8d

Apr 06, 2009

add to sequence_update_features list · 00341ea2

tjc authored 15 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10401 ee4ac58c-ac51-4696-9907-e4b3aa274f04

00341ea2

Apr 03, 2009

add sequence_update_features · cfaf63fb

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@10379 ee4ac58c-ac51-4696-9907-e4b3aa274f04

cfaf63fb

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