Commits · a645ad57edeec989e753a4414aa0bdbfb0854077 · violethaze74 / Artemis

Jul 12, 2012
- fix for creating features from read peaks with concat sequences · a645ad57
  tcarver authored 12 years ago
  
  a645ad57
Jul 11, 2012
- provide options for threshold and minimum feature size for creating · a5f7f9d5
  tcarver authored 12 years ago
  
  features from coverage
  a5f7f9d5
Jul 10, 2012
- adding create features option · db03f478
  tcarver authored 12 years ago
  
  db03f478
Jul 05, 2012
- fixes for java 1.5 · b708394d
  tcarver authored 12 years ago
  
  b708394d
- fixes for Java1.5 · e70d3b26
  tcarver authored 12 years ago
  
  e70d3b26
Jul 04, 2012
- update · 802bf01d
  tcarver authored 12 years ago
  
  802bf01d
- update · 76e09356
  tcarver authored 12 years ago
  
  76e09356
- fix for concatenated sequences in a different order to the BAM header · ac67866c
  tcarver authored 12 years ago
  
  ac67866c
- fix for warning message in linux · bc17906f
  tcarver authored 12 years ago
  
  bc17906f
Jul 03, 2012
- ensure synonyms are not duplicated when splitting and adding a · b394f21d
  tcarver authored 12 years ago
  
  prev_sys_id
  b394f21d
Jul 02, 2012
- clear GFF cache · 231ddff1
  tcarver authored 12 years ago
  
  231ddff1
Jun 28, 2012
- phase is REQUIRED for all CDS features · a9953776
  tcarver authored 12 years ago
  
  a9953776
- update · e9f9c6fa
  tcarver authored 12 years ago
  
  e9f9c6fa
Jun 26, 2012
- tidy · acfb70be
  tcarver authored 12 years ago
  
  acfb70be
- fix for unmerge · bc95c7d4
  tcarver authored 12 years ago
  
  bc95c7d4
Jun 25, 2012
- allow user to open database entry using gene or sequence ID · 0b55e078
  tcarver authored 12 years ago
  
  0b55e078
Jun 22, 2012
- add ID of second gene on merge as prev_sys_id · 70715460
  tcarver authored 12 years ago
  
  70715460
- throw an error if the feature does not exist in the database · 5414f376
  tcarver authored 12 years ago
  
  5414f376
Jun 21, 2012
- Merge branch 'master' of ssh://github.com/tcarver/Artemis · 742027ad
  tcarver authored 12 years ago
  
  742027ad
- update · 174f6b41
  tcarver authored 12 years ago
  
  174f6b41
- fix for displaying the colour button · df70a8bc
  tcarver authored 12 years ago
  
  df70a8bc
- add option to switch the coverage graph to plot by the strand · 067e8216
  tcarver authored 12 years ago
  
  067e8216
Jun 20, 2012
- if deleting/obsoleting a CDS then delete/obsolete the entire gene · 353f1157
  tcarver authored 12 years ago
  
  model
  353f1157
Jun 19, 2012
- when using SHIFT to drag the ends of feature keep the selection · 01218b67
  tcarver authored 12 years ago
  
  01218b67
Jun 18, 2012
- highlight selection range on graphs · 5eb0d1c8
  tcarver authored 12 years ago
  
  5eb0d1c8
- remove unused import · 01fc2f0b
  tcarver authored 12 years ago
  
  01fc2f0b
- exec · edf3e95d
  tcarver authored 12 years ago
  
  edf3e95d
- exec · b8c246ce
  tcarver authored 12 years ago
  
  b8c246ce
- use artemis picard · fe929f55
  tcarver authored 12 years ago
  
  fe929f55
- update · 6381afb0
  tcarver authored 12 years ago
  
  6381afb0
- add help changes · 6b58bbeb
  tcarver authored 12 years ago
  
  6b58bbeb
Jun 15, 2012
- add option for grouping bam's · 177243de
  tcarver authored 12 years ago
  
  177243de
- facility for grouping bam's · 217126e5
  tcarver authored 12 years ago
  
  217126e5
- use mitochondrialTranslationTable in organismprop · 23879344
  tcarver authored 12 years ago
  
  23879344
- use mitochondrialTranslationTable in chado organismprop · f2023246
  tcarver authored 12 years ago
  
  f2023246
Jun 13, 2012
- add GI to the hyperlinks list · 47844a85
  tcarver authored 12 years ago
  
  47844a85
- use SegmentBorder.HIGHLIGHT_BORDER_COLOUR to highlight exons · 9188bc66
  tcarver authored 12 years ago
  
  9188bc66
- add HIGHLIGHT_BORDER_COLOUR · 5b040787
  tcarver authored 12 years ago
  
  5b040787
Jun 12, 2012
- fix for the initial display of reads mapped to short sequences · 1cc57f14
  tcarver authored 12 years ago
  
  1cc57f14
- fix for start codon cache · 1580c03a
  tcarver authored 12 years ago
  
  1580c03a

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