Commits · bc5268376f66ca7f52b78d0480a0f4d6d478897d · violethaze74 / Artemis

Aug 07, 2008

add ping query to SimpleDataSource · bc526837

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8485 ee4ac58c-ac51-4696-9907-e4b3aa274f04

bc526837

add Connection logger · 1e55bc80

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8484 ee4ac58c-ac51-4696-9907-e4b3aa274f04

1e55bc80

Aug 06, 2008

fix for lazy data when looking for duplicates · dd328b52

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8482 ee4ac58c-ac51-4696-9907-e4b3aa274f04

dd328b52

Aug 05, 2008

use Pool.TimeToWait · ad7faa05

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8463 ee4ac58c-ac51-4696-9907-e4b3aa274f04

ad7faa05

add isObsolete to reserved tags · 96373953

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8462 ee4ac58c-ac51-4696-9907-e4b3aa274f04

96373953

fix · a7f53f67

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8460 ee4ac58c-ac51-4696-9907-e4b3aa274f04

a7f53f67

fix for isObsolete tag when duplicating features, e.g. when unmerging · 4238e80a

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8459 ee4ac58c-ac51-4696-9907-e4b3aa274f04

4238e80a

fix for opening database entry with -Dread_only · 184c25b9

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8456 ee4ac58c-ac51-4696-9907-e4b3aa274f04

184c25b9

Aug 04, 2008

fix for hyperlinks · 1cc22bc6

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8441 ee4ac58c-ac51-4696-9907-e4b3aa274f04

1cc22bc6

fix hyperlinks · e74c6152

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8440 ee4ac58c-ac51-4696-9907-e4b3aa274f04

e74c6152

Aug 01, 2008

update · bdbe9e84

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8432 ee4ac58c-ac51-4696-9907-e4b3aa274f04

bdbe9e84

changes for reading featureloced features · 964d529d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8431 ee4ac58c-ac51-4696-9907-e4b3aa274f04

964d529d

change auto save initial start · eac17974

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8430 ee4ac58c-ac51-4696-9907-e4b3aa274f04

eac17974

allow public access to handleMouseSingleClick so this can be used to launch... · 8890c115

tjc authored 16 years ago

allow public access to handleMouseSingleClick so this can be used to launch database links from other classes - e.g. ProteinMapPanel


git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8429 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8890c115

changes to handle protein map qualifiers · 0bacc2fc

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8428 ee4ac58c-ac51-4696-9907-e4b3aa274f04

0bacc2fc

add protein map to gene builder · 5c141277

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8427 ee4ac58c-ac51-4696-9907-e4b3aa274f04

5c141277

rename class and made more generic so that it handles all featureloced... · b1646b62

tjc authored 16 years ago

rename class and made more generic so that it handles all featureloced features e.g. similarity, polypeptide_domain


git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8426 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b1646b62

update polypeptide qualifiers · f198a9e0

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8425 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f198a9e0

retrieve the features that are featureloced to feaure · 140473d1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8424 ee4ac58c-ac51-4696-9907-e4b3aa274f04

140473d1

Jul 31, 2008

tidy · b18923bc

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8401 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b18923bc

Jul 29, 2008

fix for read entry in · cf888d5d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8379 ee4ac58c-ac51-4696-9907-e4b3aa274f04

cf888d5d

ignore case of database names · 5c5c3ca5

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8377 ee4ac58c-ac51-4696-9907-e4b3aa274f04

5c5c3ca5

circular plot run script · 3f13ade0

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8364 ee4ac58c-ac51-4696-9907-e4b3aa274f04

3f13ade0

Jul 28, 2008

fix for get start point of hyperlink · 38b0b150

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8363 ee4ac58c-ac51-4696-9907-e4b3aa274f04

38b0b150

fix for setting EC_number · 8a0f77d1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8354 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8a0f77d1

Jul 24, 2008

add polypeptide_domain to gff extra qualifiers · 93f58ec4

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8350 ee4ac58c-ac51-4696-9907-e4b3aa274f04

93f58ec4

reduce time for postgres bar · 8aae960f

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8349 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8aae960f

group blast programs into there own submenus · 51fe33b1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8348 ee4ac58c-ac51-4696-9907-e4b3aa274f04

51fe33b1

Jul 22, 2008

use UniProtKB for GO · f79b493d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8325 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f79b493d

update · 73c71846

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8324 ee4ac58c-ac51-4696-9907-e4b3aa274f04

73c71846

set preferred size · 40f082f7

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8322 ee4ac58c-ac51-4696-9907-e4b3aa274f04

40f082f7

Jul 21, 2008

tidy · 53019bc5

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8308 ee4ac58c-ac51-4696-9907-e4b3aa274f04

53019bc5

tidy · 706bfcc1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8307 ee4ac58c-ac51-4696-9907-e4b3aa274f04

706bfcc1

convert keys option added · d146420a

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8306 ee4ac58c-ac51-4696-9907-e4b3aa274f04

d146420a

ignore thmm · 2f06424b

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8305 ee4ac58c-ac51-4696-9907-e4b3aa274f04

2f06424b

update · f5cfa229

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8284 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f5cfa229

add action controller · 6c4fba15

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8281 ee4ac58c-ac51-4696-9907-e4b3aa274f04

6c4fba15

remove add translation option · b6ff3d5d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8279 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b6ff3d5d

Jul 18, 2008

tidy · 8674cdf4

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8274 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8674cdf4

update · 44f24f19

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8273 ee4ac58c-ac51-4696-9907-e4b3aa274f04

44f24f19

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