Commits · effec326a6977f4fd7ae6549af2805febd8b1f32 · violethaze74 / Artemis

Aug 17, 2012
- update · effec326
  tcarver authored 12 years ago
  
  effec326
- update · 59dedcc0
  tcarver authored 12 years ago
  
  59dedcc0
- add base similarity plot · f4121e95
  tcarver authored 12 years ago
  
  f4121e95
- randomly select colours for lines · 01241ce0
  tcarver authored 12 years ago
  
  01241ce0
- fix for when the feature list is not visible · feb0d996
  tcarver authored 12 years ago
  
  feb0d996
Aug 15, 2012
- Merge branch 'master' of ssh://github.com/tcarver/Artemis · 76408eef
  tcarver authored 12 years ago
  
  76408eef
- update · 5899c34e
  tcarver authored 12 years ago
  
  5899c34e
- parsing of the header happens during SAMFileReader construction, so need · a7d739a3
  tcarver authored 12 years ago
  
  to set the default stringency
  a7d739a3
- update to 1.74 · baffec76
  tcarver authored 12 years ago
  
  baffec76
Aug 14, 2012
- report sense and antisense read counts and rpkm · d5fdac2c
  tcarver authored 12 years ago
  
  d5fdac2c
Aug 09, 2012
- add picard libs to classpath · f19c332e
  tcarver authored 12 years ago
  
  f19c332e
- update · c2db6359
  tcarver authored 12 years ago
  
  c2db6359
- disable analyse option if there is no feature display · 5cf4bd24
  tcarver authored 12 years ago
  
  5cf4bd24
- add save button · c174476a
  tcarver authored 12 years ago
  
  c174476a
Aug 08, 2012
- update · 43c73d9e
  tcarver authored 12 years ago
  
  43c73d9e
- changes to allow the use of BAM file grouping when creating features · 5142f826
  tcarver authored 12 years ago
  
  5142f826
Aug 07, 2012
- add option to plot coverage by strand · a454eb62
  tcarver authored 12 years ago
  
  a454eb62
Aug 03, 2012
- add option to create new features where the read count is seen in a · b94fa291
  tcarver authored 12 years ago
  
  minimum number of BAM files
  b94fa291
- fix createEntry() for the cases where there is no default entry selected · 29c45a5f
  tcarver authored 12 years ago
  
  29c45a5f
Aug 01, 2012
- add merge option · fa5af542
  tcarver authored 12 years ago
  
  fa5af542
- tidy · f4675a7d
  tcarver authored 12 years ago
  
  f4675a7d
- update dnaplotter · ca015063
  tcarver authored 12 years ago
  
  ca015063
Jul 30, 2012
- update · 9275930a
  tcarver authored 12 years ago
  
  9275930a
- Merge branch 'master' of ssh://github.com/tcarver/Artemis · 4091c176
  tcarver authored 12 years ago
  
  4091c176
- fix for codon_start on reverse strand · d894e7b8
  tcarver authored 12 years ago
  
  d894e7b8
Jul 27, 2012
- update help msg as per art · 6ba78886
  tcarver authored 12 years ago
  
  6ba78886
- update help · c5e902a6
  tcarver authored 12 years ago
  
  c5e902a6
- remove lookseq options · f65240bb
  tcarver authored 12 years ago
  
  f65240bb
- add coverage by strand option to views menu · 76f5ac26
  tcarver authored 12 years ago
  
  76f5ac26
Jul 26, 2012
- mark obsolete and partial features · c821d245
  tcarver authored 12 years ago
  
  c821d245
- add isPartial() · 5b1cd3ad
  tcarver authored 12 years ago
  
  5b1cd3ad
- add getters() · 3d80ae1f
  tcarver authored 12 years ago
  
  3d80ae1f
Jul 25, 2012
- introduce a menubar before pack() to fix saved_size · 11ec3ef2
  tcarver authored 12 years ago
  
  11ec3ef2
- update · f03c8958
  tcarver authored 12 years ago
  
  f03c8958
- fix for redisplaying using exceed on windows · e7bdd01e
  tcarver authored 12 years ago
  
  e7bdd01e
Jul 24, 2012
- set viewport position when switching to coverage plot · 9c938f52
  tcarver authored 12 years ago
  
  9c938f52
- change navigator behaviour so that it re-opens the last navigator window · 4bb86c4e
  tcarver authored 12 years ago
  
  rather than a new window
  4bb86c4e
Jul 20, 2012
- ensure unique project names · 64b60659
  tcarver authored 12 years ago
  
  64b60659
Jul 18, 2012
- Changing file permissions · 859d8e02
  tcarver authored 12 years ago
  
  859d8e02
- Changing file permissions · 5909c466
  tcarver authored 12 years ago
  
  5909c466

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