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Created with Raphaël 2.2.014May1312876530Apr2927242322212017161498763131Mar272625242320191817161365427Feb26252423191817161210976543227Jan2322201915141398716Dec1511109432128Nov2726252421201917161413121110765331Oct3028242322201817161514131098762130Sep2524232219181615121110843220Aug1918151413121187654131Jul2928242221181716151110984230Jun272623201817161211104329May22211615141312862125Apr223126Mar25191312add getLazyFeatureExactfix for manual ortholog / paralog insertsrenamerun pfam search optionmake a separate class for the progress barremove unused importspeed up gene builder opening by putting the construction of the match panel in a separate threadadd private to RNAssend sequence searches to pfamload a pub_dbxref when a pub is createdadd GmodDAOmake PubDbXRef.xmlfix in updateQualifierString() for updating product without evidence codesimplement addDomain() to add polypeptide_domain features to the feature displayadd getNucLocation() to get nucleotide location for featurelocs in protein coordinatescheck for primary dbxref in addLazyQualifiers()add option to show polypeptide_domains in feature displaychange double quotes to single quotesupdatewrite an appropriate header when writing basesadd option for writing out a combination of upstream, feature and downstream basesgrey out panel when view is being scrolledspeed up opening options panelset busy cursor when openingimprove lookadd new file selection panelfix ticksfix when running with no argsfix opening Artemisinclude option to ignore methylation sitesset proxySet to trueupdateadd proxy settings to options dialogclose with system.exit()capitalise the evidence codescorrect typo in ISO evidence codefix for updating uniquename on child featuresupdatechange to menu for clarityadd a filter to search for multiple systematic name qualifiers