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Created with Raphaël 2.2.024Feb19943229Jan21191815141312876549Dec74130Nov2624232019171312111064323Oct22212019161514131298653130Sep29282524232221191817161514432128Aug272625242019181714131211106329Jul272423222120171615137632130Jun292625242322191816121095432129May272615141312876530Apr2927242322212017161498763131Mar272625242320191817161365427Feb26252423191817161210976543227Jan2322201915141398716Decadd an option for adding private fields as a feature_cvtermtidy importsadd private_cvname flag to indicate a cv used to store private fieldschanges to handle stop_codon_redefined_as_selenocysteine qualifierupdatefilter out unmapped reads by defaultchange visibility of read unmapped flagadd rpt_unit_seq to repeat_regionadd rpt_unit_seq remove contents of the BAM panel when reading in a new BAM fileset values to null for featureprops with no valuesinclude featureprops with null valuesnew releasecatch net.sf.samtools.util.RuntimeIOException's such as missing index (.bai) fileif polypeps do not exist provide a list of transcripts to form ortholog linksadd getPartOfFeatures()add link to bamview websiteadd pfam to run menufix for searching pfamchanging memory on MacOSXchangesmove to java1.5when changing groups of featurelocs check they are not partialupdate date and versionupdate datetrim spaces from literature qualifiersupdateprovide the option to apply the colour to all plotsfor heat maps display the plot column number in the tooltipupdateupdatechanges to allow file of file names to be readable from a URLfix search for X on reverse strandupdateshow insertions by defaultallow userplot to be loaded as a URLupdateability to read file of BAM filenames from the command linechange to utility methods to protected staticupdate
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