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Commit 42c891a1 authored by tjc's avatar tjc
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allow for X

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@16073 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent e5471855
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......@@ -109,7 +109,7 @@ public class VariantBase
protected boolean isNonVariant()
{
if (alt.equals(".") && record.getRef().length() == 1)
if ((alt.equals(".") || alt.equals("X")) && record.getRef().length() == 1)
return true;
return false;
}
......
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