cram support

44a930fc · tcarver · 71caa686 · 44a930fc
Commit 44a930fc authored 13 years ago by tcarver
--- a/uk/ac/sanger/artemis/components/alignment/CRAMReferenceSequenceFile.java
+++ b/uk/ac/sanger/artemis/components/alignment/CRAMReferenceSequenceFile.java
@@ -74,7 +74,7 @@ import uk.ac.sanger.artemis.util.OutOfRangeException;
    {
      try
      {
-        //if(bamView.isConcatSequences())
+        if(bamView.isConcatSequences())
        {
          int offset = bamView.getSequenceOffset(contig);
          start += offset;