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Commit 5de9e015 authored by tjc's avatar tjc
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update 

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@15314 ee4ac58c-ac51-4696-9907-e4b3aa274f04
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...@@ -6,7 +6,7 @@ to be indexed as described below. They require &prog; to be run with at least ...@@ -6,7 +6,7 @@ to be indexed as described below. They require &prog; to be run with at least
Java 1.6. Java 1.6.
</PARA> </PARA>
<PARA> <PARA>
BAM files need to be sorted and indexed using <ULINK <ULINK URL="http://samtools.sourceforge.net/">BAM</ULINK> files need to be sorted and indexed using <ULINK
URL="http://samtools.sourceforge.net/">samtools</ULINK>. The index file should be in URL="http://samtools.sourceforge.net/">samtools</ULINK>. The index file should be in
the same directory as the BAM file. This provides an integrated the same directory as the BAM file. This provides an integrated
<ULINK URL="http://bamview.sourceforge.net/">BamView</ULINK> panel in &prog;, displaying <ULINK URL="http://bamview.sourceforge.net/">BamView</ULINK> panel in &prog;, displaying
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