fix for base view

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@11886 ee4ac58c-ac51-4696-9907-e4b3aa274f04

uk/ac/sanger/artemis/components/alignment/JamView.java

@@ -382,7 +382,7 @@ public class JamView extends JPanel
         else
           readFromBam(start, end);
 
-        if(!checkBoxStackView.isSelected())
+        if(!checkBoxStackView.isSelected() || pixPerBase*3 >= ALIGNMENT_PIX_PER_BASE)
           Collections.sort(readsInView, new SAMRecordComparator());
         setCursor(cdone);
       }