Skip to content
Snippets Groups Projects
Commit d6352059 authored by tjc's avatar tjc
Browse files

more qualifiers 

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@5507 ee4ac58c-ac51-4696-9907-e4b3aa274f04
parent c184518d
Branches
Tags
No related merge requests found
Hide whitespace changes
Inline Side-by-side
etc/feature_keys_gff
+ 89
− 89
View file @ d6352059
...@@ -5,94 +5,94 @@ ...@@ -5,94 +5,94 @@
# #
# key Qualifiers (@=mandatory) # key Qualifiers (@=mandatory)
# ======= ======================== # ======= ========================
region ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
contig ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score contig ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
supercontig ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score supercontig ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
chromosome ID Name Alias Parent Note note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score chromosome ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
gene ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score gene ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
CDS ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score results note job CDS ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified codon_start description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score results note job
polypeptide ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref product molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score mass isoelectric charge source polypeptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term Dbxref product molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score mass isoelectric charge source
pseudogene ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score pseudogene ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
intron ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score intron ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
exon ID Name Alias Parent Note description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score exon ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified codon_start description locus stable_id ec_number gene_symbol Ontology_term Dbxref molecule_type size organism_name strain translation_table topology localization gff_source gff_seqname score
three_prime_UTR ID Alias Parent Note systematic_id db_xref note three_prime_UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified systematic_id db_xref note
five_prime_UTR ID Alias Parent Note systematic_id db_xref note five_prime_UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified systematic_id db_xref note
transcript transcript ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
primary_transcript ID Name Alias Parent Note db_xref product note controlled_curation primary_transcript ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
tRNA ID Name Alias Parent Note db_xref product note controlled_curation tRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
rRNA ID Name Alias Parent Note db_xref product note controlled_curation rRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
mRNA ID Name Alias Parent Note db_xref product note controlled_curation mRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
snRNA ID Name Alias Parent Note db_xref product note controlled_curation snRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
scRNA ID Name Alias Parent Note db_xref product note controlled_curation scRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
snoRNA ID Name Alias Parent Note db_xref product note controlled_curation snoRNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified db_xref product note controlled_curation
polypeptide_domain ID Name Alias Parent Note polypeptide_domain ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
signal_peptide ID Name Alias Parent Note signal_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
nucleotide_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term gff_source gff_seqname score nucleotide_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified gff_source gff_seqname score
translated_nucleotide_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term translated_nucleotide_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
protein_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term cluster gff_source gff_seqname score protein_match ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified cluster gff_source gff_seqname score
sequence_difference ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term sequence_difference ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
direct_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term direct_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
inverted_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term inverted_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
dispersed_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term dispersed_repeat ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified
repeat_family ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term gff_source gff_seqname score repeat_family ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified gff_source gff_seqname score
transposable_element ID Name Alias Parent Target Gap Derives_from Note Dbxref Ontology_term transposable_element ID Name Alias Parent Target Gap Derives_from Note Dbxref Ontology_term feature_id timelastmodified
binding_site ID Name Alias Parent Target Gap Derives_from Note Dbxref Ontology_term binding_site ID Name Alias Parent Target Gap Derives_from Note Dbxref Ontology_term feature_id timelastmodified
- ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term EC_number PCR_conditions allele anticodon bound_moiety cell_line cell_type chromosome citation clone clone_lib codon codon_start cons_splice country cultivar db_xref dev_stage direction ecotype environmental_sa evidence exception focus frequency function gene germline haplotype insertion_seq isolate isolation_source lab_host label locus_tag macronuclear map mod_base mol_type note number organelle organism partial phenotype plasmid pop_variant product protein_id proviral pseudo rearranged replace rpt_family rpt_type rpt_unit segment sequenced_mol serotype serovar sex specific_host specimen_voucher standard_name strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transl_except transl_table translation transposon usedin variety virion - ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified EC_number PCR_conditions allele anticodon bound_moiety cell_line cell_type chromosome citation clone clone_lib codon codon_start cons_splice country cultivar db_xref dev_stage direction ecotype environmental_sa evidence exception focus frequency function gene germline haplotype insertion_seq isolate isolation_source lab_host label locus_tag macronuclear map mod_base mol_type note number organelle organism partial phenotype plasmid pop_variant product protein_id proviral pseudo rearranged replace rpt_family rpt_type rpt_unit segment sequenced_mol serotype serovar sex specific_host specimen_voucher standard_name strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transl_except transl_table translation transposon usedin variety virion
-10_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin -10_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin
-35_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin -35_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin
3'UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin 3'UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
3'clip ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin 3'clip ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
5'UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin 5'UTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
5'clip ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin 5'clip ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
CAAT_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial usedin CAAT_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial usedin
C_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin C_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
D-loop ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial usedin D-loop ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial usedin
D_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin D_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
GC_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial usedin GC_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial usedin
J_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin J_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
LTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin LTR ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
N_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin N_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
RBS ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin RBS ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin
STS ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin STS ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin
S_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin S_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
TATA_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial usedin TATA_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial usedin
V_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin V_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
V_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin V_segment ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence gene label locus_tag map note partial product pseudo standard_name transl_except translation usedin
attenuator ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note operon partial phenotype usedin attenuator ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note operon partial phenotype usedin
conflict ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @citation allele db_xref evidence gene label locus_tag map note replace usedin conflict ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @citation allele db_xref evidence gene label locus_tag map note replace usedin
enhancer ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin enhancer ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin
gap ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @estimated_length gap ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @estimated_length
iDNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note number partial standard_name usedin iDNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note number partial standard_name usedin
mat_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term EC_number allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin mat_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified EC_number allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin
misc_RNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial product standard_name usedin misc_RNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial product standard_name usedin
misc_binding ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @bound_moiety allele citation db_xref evidence function gene label locus_tag map note partial usedin misc_binding ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @bound_moiety allele citation db_xref evidence function gene label locus_tag map note partial usedin
misc_difference ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation clone db_xref evidence gene label locus_tag map note partial phenotype replace standard_name usedin misc_difference ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation clone db_xref evidence gene label locus_tag map note partial phenotype replace standard_name usedin
misc_feature ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note number partial phenotype product pseudo standard_name usedin misc_feature ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note number partial phenotype product pseudo standard_name usedin
misc_recomb ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note organism partial standard_name usedin misc_recomb ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note organism partial standard_name usedin
misc_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial phenotype standard_name usedin misc_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial phenotype standard_name usedin
misc_structure ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin misc_structure ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
modified_base ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @mod_base allele citation db_xref evidence frequency gene label locus_tag map note usedin modified_base ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @mod_base allele citation db_xref evidence frequency gene label locus_tag map note usedin
old_sequence ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @citation allele db_xref evidence gene label locus_tag map note partial replace usedin old_sequence ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @citation allele db_xref evidence gene label locus_tag map note partial replace usedin
operon ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @operon allele citation db_xref evidence function label map note phenotype pseudo standard_name usedin operon ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @operon allele citation db_xref evidence function label map note phenotype pseudo standard_name usedin
oriT ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele bound_moiety citation db_xref direction evidence gene label locus_tag map note rpt_family rpt_type rpt_unit standard_name usedin oriT ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele bound_moiety citation db_xref direction evidence gene label locus_tag map note rpt_family rpt_type rpt_unit standard_name usedin
polyA_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial usedin polyA_signal ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial usedin
polyA_site ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note usedin polyA_site ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note usedin
precursor_RNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial product standard_name usedin precursor_RNA ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial product standard_name usedin
prim_transcript ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin prim_transcript ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin
primer_bind ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term PCR_conditions allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin primer_bind ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified PCR_conditions allele citation db_xref evidence gene label locus_tag map note partial standard_name usedin
promoter ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial phenotype pseudo standard_name usedin promoter ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial phenotype pseudo standard_name usedin
protein_bind ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @bound_moiety allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin protein_bind ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @bound_moiety allele citation db_xref evidence function gene label locus_tag map note partial standard_name usedin
rep_origin ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref direction evidence gene label locus_tag map note partial standard_name usedin rep_origin ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref direction evidence gene label locus_tag map note partial standard_name usedin
repeat_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene insertion_seq label locus_tag map note partial rpt_family rpt_type rpt_unit standard_name transposon usedin repeat_region ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene insertion_seq label locus_tag map note partial rpt_family rpt_type rpt_unit standard_name transposon usedin
repeat_unit ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note partial rpt_family rpt_type rpt_unit usedin repeat_unit ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note partial rpt_family rpt_type rpt_unit usedin
satellite ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note partial rpt_family rpt_type rpt_unit standard_name usedin satellite ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note partial rpt_family rpt_type rpt_unit standard_name usedin
sig_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin sig_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin
source ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term @organism cell_line cell_type chloroplast chromoplast chromosome citation clone clone_lib country cultivar cyanelle db_xref dev_stage ecotype environmental_sample evidence focus frequency germline haplotype insertion_seq isolate isolation_source kinetoplast lab_host label macronuclear map mitochondrion mol_type note organelle plasmid pop_variant proviral rearranged segment sequenced_mol serotype serovar sex specific_host specimen_voucher strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transposon usedin variety virion source ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified @organism cell_line cell_type chloroplast chromoplast chromosome citation clone clone_lib country cultivar cyanelle db_xref dev_stage ecotype environmental_sample evidence focus frequency germline haplotype insertion_seq isolate isolation_source kinetoplast lab_host label macronuclear map mitochondrion mol_type note organelle plasmid pop_variant proviral rearranged segment sequenced_mol serotype serovar sex specific_host specimen_voucher strain sub_clone sub_species sub_strain tissue_lib tissue_type transgenic transposon usedin variety virion
stem_loop ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin stem_loop ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence function gene label locus_tag map note operon partial standard_name usedin
terminator ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note operon partial standard_name usedin terminator ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note operon partial standard_name usedin
transit_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin transit_peptide ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation codon codon_start db_xref evidence function gene label locus_tag map note partial product pseudo standard_name transl_except usedin
unsure ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence gene label locus_tag map note replace usedin unsure ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence gene label locus_tag map note replace usedin
variation ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term allele citation db_xref evidence frequency gene label locus_tag map note partial phenotype product replace standard_name usedin variation ID Name Alias Parent Note Target Gap Derives_from Dbxref Ontology_term feature_id timelastmodified allele citation db_xref evidence frequency gene label locus_tag map note partial phenotype product replace standard_name usedin
etc/qualifier_types_gff
+ 2
− 0
View file @ d6352059
...@@ -36,6 +36,7 @@ Target no text ...@@ -36,6 +36,7 @@ Target no text
Gap no text Gap no text
Derives_from no text Derives_from no text
Dbxref no "text" Dbxref no "text"
feature_id no number 1 99999999
colour no text colour no text
color no text color no text
mass no text mass no text
...@@ -124,6 +125,7 @@ strain no "text" ...@@ -124,6 +125,7 @@ strain no "text"
sub_clone no "text" sub_clone no "text"
sub_species no "text" sub_species no "text"
sub_strain no "text" sub_strain no "text"
timelastmodified no text
tissue_lib no "text" tissue_lib no "text"
tissue_type no "text" tissue_type no "text"
transgenic no "text" transgenic no "text"
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment