Commits · 1031005e44fa536067d4d148518970d5a919f6e7 · violethaze74 / Artemis

Sep 18, 2013
- gff to embl · 1031005e
  tcarver authored 11 years ago
  
  1031005e
- add options to show obsolete features · f5aaa2c6
  tcarver authored 11 years ago
  
  f5aaa2c6
- gff to embl · 18f0a433
  tcarver authored 11 years ago
  
  18f0a433
- check for chado gene in mapGffToNativeFeature() · 7143089e
  tcarver authored 11 years ago
  
  7143089e
- change visibility of addQualifierToEntryInfo() addAllKeysQualifiers() · 8574e171
  tcarver authored 11 years ago
  
  8574e171
Sep 17, 2013
- remove unused constructor · 5a3b3bb0
  tcarver authored 11 years ago
  
  5a3b3bb0
Sep 16, 2013
- fix for switching contig · 30cf4036
  tcarver authored 11 years ago
  
  30cf4036
- add charAt() for AddMenu.markAmbiguities() · d9f908a2
  tcarver authored 11 years ago
  
  d9f908a2
- update · 38ab69d2
  tcarver authored 11 years ago
  
  38ab69d2
Sep 13, 2013
- update · a7a2f90e
  tcarver authored 11 years ago
  
  a7a2f90e
- edit menu tests · 19c3eb76
  tcarver authored 11 years ago
  
  19c3eb76
- add test-headless target · 9ab63d6c
  tcarver authored 11 years ago
  
  9ab63d6c
- fix for splitting GFF genes and then undo-ing the split · dc12bf83
  tcarver authored 11 years ago
  
  dc12bf83
- change deleteAllFeature() to optionally delete chado gene features · 9214596d
  tcarver authored 11 years ago
  
  9214596d
- add getCDSFeatureByIdPrefix() · 733490fd
  tcarver authored 11 years ago
  
  733490fd
Sep 12, 2013
- use Utils.getEntryGroup() · 37271790
  tcarver authored 11 years ago
  
  37271790
- add getEntryGroup() · faf8bdac
  tcarver authored 11 years ago
  
  faf8bdac
- use assertEquals · 5b079b46
  tcarver authored 11 years ago
  
  5b079b46
- update · 3fb32052
  tcarver authored 11 years ago
  
  3fb32052
- update junit · a9ab0cfe
  tcarver authored 11 years ago
  
  a9ab0cfe
- multiple sequence GFF · 84c881e3
  tcarver authored 11 years ago
  
  84c881e3
- feature offset in GFF with multiple sequences · 2222c866
  tcarver authored 11 years ago
  
  2222c866
Sep 10, 2013
- update · ff118c0f
  tcarver authored 11 years ago
  
  ff118c0f
- fix for adjusting coordinate offset in multiple sequence GFF · cf207870
  tcarver authored 11 years ago
  
  cf207870
- add fasta_record to extra_keys_gff · 58c1b5ea
  tcarver authored 11 years ago
  
  58c1b5ea
Sep 09, 2013
- update · 3370dbe9
  tcarver authored 11 years ago
  
  3370dbe9
- fix for when FeatureDisplay is not used · e4f5b4dc
  tcarver authored 11 years ago
  
  e4f5b4dc
- update version · 99875ad0
  tcarver authored 11 years ago
  
  99875ad0
- validation tests · 72ef2ef5
  tcarver authored 11 years ago
  
  72ef2ef5
Sep 06, 2013
- add GFF files · 4413158f
  tcarver authored 11 years ago
  
  4413158f
- change visibility of functions and fix for non coding transcripts in GFF · 8880fbfe
  tcarver authored 11 years ago
  
  files
  8880fbfe
Sep 04, 2013
- add option for defining alternative products in the cases where there · 3f40cfc2
  tcarver authored 11 years ago
  
  are multiple products and one is the the recomended product
  3f40cfc2
Sep 03, 2013
- fix for GFF on the command line · c7c292f9
  tcarver authored 11 years ago
  
  c7c292f9
Aug 30, 2013
- check to ensure not recursively trying to read from the same file · e632e27a
  tcarver authored 11 years ago
  
  e632e27a
Aug 27, 2013
- fix for blank lines in GenBank sequence · b0cc9a15
  tcarver authored 11 years ago
  
  b0cc9a15
Aug 22, 2013
- remove commented out function · 772f8de2
  tcarver authored 11 years ago
  
  772f8de2
- simplify to one constructor · b6ccb498
  tcarver authored 11 years ago
  
  b6ccb498
- change visibility of orig_qualifier_text · 834d9871
  tcarver authored 11 years ago
  
  834d9871
- tidy · a8b46d7c
  tcarver authored 11 years ago
  
  a8b46d7c
Aug 21, 2013
- update · 00346261
  tcarver authored 11 years ago
  
  00346261

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