Commits · 140473d1a8c81090d164a5c744ec221a81bc65a2 · violethaze74 / Artemis

Aug 01, 2008

retrieve the features that are featureloced to feaure · 140473d1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8424 ee4ac58c-ac51-4696-9907-e4b3aa274f04

140473d1

Jul 31, 2008

tidy · b18923bc

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8401 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b18923bc

Jul 29, 2008

fix for read entry in · cf888d5d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8379 ee4ac58c-ac51-4696-9907-e4b3aa274f04

cf888d5d

ignore case of database names · 5c5c3ca5

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8377 ee4ac58c-ac51-4696-9907-e4b3aa274f04

5c5c3ca5

circular plot run script · 3f13ade0

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8364 ee4ac58c-ac51-4696-9907-e4b3aa274f04

3f13ade0

Jul 28, 2008

fix for get start point of hyperlink · 38b0b150

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8363 ee4ac58c-ac51-4696-9907-e4b3aa274f04

38b0b150

fix for setting EC_number · 8a0f77d1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8354 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8a0f77d1

Jul 24, 2008

add polypeptide_domain to gff extra qualifiers · 93f58ec4

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8350 ee4ac58c-ac51-4696-9907-e4b3aa274f04

93f58ec4

reduce time for postgres bar · 8aae960f

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8349 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8aae960f

group blast programs into there own submenus · 51fe33b1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8348 ee4ac58c-ac51-4696-9907-e4b3aa274f04

51fe33b1

Jul 22, 2008

use UniProtKB for GO · f79b493d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8325 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f79b493d

update · 73c71846

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8324 ee4ac58c-ac51-4696-9907-e4b3aa274f04

73c71846

set preferred size · 40f082f7

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8322 ee4ac58c-ac51-4696-9907-e4b3aa274f04

40f082f7

Jul 21, 2008

tidy · 53019bc5

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8308 ee4ac58c-ac51-4696-9907-e4b3aa274f04

53019bc5

tidy · 706bfcc1

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8307 ee4ac58c-ac51-4696-9907-e4b3aa274f04

706bfcc1

convert keys option added · d146420a

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8306 ee4ac58c-ac51-4696-9907-e4b3aa274f04

d146420a

ignore thmm · 2f06424b

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8305 ee4ac58c-ac51-4696-9907-e4b3aa274f04

2f06424b

update · f5cfa229

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8284 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f5cfa229

add action controller · 6c4fba15

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8281 ee4ac58c-ac51-4696-9907-e4b3aa274f04

6c4fba15

remove add translation option · b6ff3d5d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8279 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b6ff3d5d

Jul 18, 2008

tidy · 8674cdf4

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8274 ee4ac58c-ac51-4696-9907-e4b3aa274f04

8674cdf4

update · 44f24f19

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8273 ee4ac58c-ac51-4696-9907-e4b3aa274f04

44f24f19

fix orthomcldb · 9d27318b

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8272 ee4ac58c-ac51-4696-9907-e4b3aa274f04

9d27318b

pcs4 fix · a7410ba3

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8271 ee4ac58c-ac51-4696-9907-e4b3aa274f04

a7410ba3

add plasmodb · 9e422071

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8269 ee4ac58c-ac51-4696-9907-e4b3aa274f04

9e422071

options for searching and deleting duplicate qualifiers · e83db98a

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8268 ee4ac58c-ac51-4696-9907-e4b3aa274f04

e83db98a

add inference · 71864a4d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8267 ee4ac58c-ac51-4696-9907-e4b3aa274f04

71864a4d

Jul 17, 2008

allow for removing duplicate qualifiers · 7e66e77d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8266 ee4ac58c-ac51-4696-9907-e4b3aa274f04

7e66e77d

Jul 16, 2008

prompt for lazy loading only if parent parsed to ReadAndWriteEntry · f0715c7c

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8243 ee4ac58c-ac51-4696-9907-e4b3aa274f04

f0715c7c

add stop_codon_redefined_as_selenocysteine · 6c56ebff

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8241 ee4ac58c-ac51-4696-9907-e4b3aa274f04

6c56ebff

tidy · 9c4f5275

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8240 ee4ac58c-ac51-4696-9907-e4b3aa274f04

9c4f5275

update · 2266fc73

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8239 ee4ac58c-ac51-4696-9907-e4b3aa274f04

2266fc73

read in mapping files · 9db37303

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8238 ee4ac58c-ac51-4696-9907-e4b3aa274f04

9db37303

chado to embl mappings · 7023862e

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8237 ee4ac58c-ac51-4696-9907-e4b3aa274f04

7023862e

Jul 15, 2008

changes for writing embl file from database mode · 4fbf060d

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8234 ee4ac58c-ac51-4696-9907-e4b3aa274f04

4fbf060d

fix for bulk reading clusters · d969e8a9

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8225 ee4ac58c-ac51-4696-9907-e4b3aa274f04

d969e8a9

Jul 11, 2008

remove LOGFILE appender from loggers · 9f59422c

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8195 ee4ac58c-ac51-4696-9907-e4b3aa274f04

9f59422c

Jul 10, 2008

update · 2350bde8

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8194 ee4ac58c-ac51-4696-9907-e4b3aa274f04

2350bde8

add translation qualifier to CDS · b5e2e583

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8193 ee4ac58c-ac51-4696-9907-e4b3aa274f04

b5e2e583

update · 55f36e98

tjc authored 16 years ago

git-svn-id: svn+ssh://svn.internal.sanger.ac.uk/repos/svn/pathsoft/artemis/trunk@8177 ee4ac58c-ac51-4696-9907-e4b3aa274f04

55f36e98

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