Commits · b79a6f02e817d70a6e8e928d9916b82a7694a589 · violethaze74 / Artemis

Jan 06, 2014
- specify CV feature_property when looking up cvterm for feature prop · b79a6f02
  tcarver authored 11 years ago
  
  b79a6f02
Dec 13, 2013
- update · 3ab74423
  tcarver authored 11 years ago
  
  3ab74423
- update · 0ddb160e
  tcarver authored 11 years ago
  
  0ddb160e
- changed for read count and rpkm to take into account strand specific tag · f1285f33
  tcarver authored 11 years ago
  
  f1285f33
Dec 05, 2013
- update · 757273ea
  tcarver authored 11 years ago
  
  757273ea
- update to 2014 · deec3129
  tcarver authored 11 years ago
  
  deec3129
Dec 04, 2013
- Merge branch 'master' of ssh://github.com/tcarver/Artemis · 6a196b97
  tcarver authored 11 years ago
  
  6a196b97
- Merge remote-tracking branch 'upstream/master' · a3bb1614
  tcarver authored 11 years ago
  
  a3bb1614
Nov 27, 2013
- warn when overlaying a GFF with a sequence onto a sequence entry · f070197d
  tcarver authored 11 years ago
  
  f070197d
- update · 17b7d055
  tcarver authored 11 years ago
  
  17b7d055
- call processJnlpAttributes() · a4cb0ea0
  tcarver authored 11 years ago
  
  a4cb0ea0
- move processJnlpAttributes() to Splash · 1b1ce8be
  tcarver authored 11 years ago
  
  1b1ce8be
- move processJnlpAttributes() to Splash · 8a9f5ba5
  tcarver authored 11 years ago
  
  8a9f5ba5
Nov 26, 2013
- Merge pull request #167 from tcarver/master · d20df7fc
  tcarver authored 11 years ago
  
  misc
  d20df7fc
- update · d42ad1aa
  tcarver authored 11 years ago
  
  d42ad1aa
- add CONTIG to genbank_hash · a93fd383
  tcarver authored 11 years ago
  
  a93fd383
Nov 21, 2013
- add selectContainedFeatures() · c2b1ad25
  tcarver authored 11 years ago
  
  c2b1ad25
- add getCDSFeatureByIdPrefix() · 1728a101
  tcarver authored 11 years ago
  
  1728a101
- add testIdAfterLocationChange · 7f4d9e74
  tcarver authored 11 years ago
  
  7f4d9e74
Nov 20, 2013
- update GFF segment range store · 24264a18
  tcarver authored 11 years ago
  
  24264a18
Nov 15, 2013
- catch exception · 963c610a
  tcarver authored 11 years ago
  
  963c610a
- call GFFUtils.updateSegmentRangeStore() for GFF features on feature · 2b0a50fc
  tcarver authored 11 years ago
  
  location change
  2b0a50fc
- move isSelenocysteine() to GFFUtils · ebc524a2
  tcarver authored 11 years ago
  
  ebc524a2
- use GFFUtils.isSelenocysteine() · e14b74bb
  tcarver authored 11 years ago
  
  e14b74bb
- gff utilities · ca45a770
  tcarver authored 11 years ago
  
  ca45a770
- remove unused option and fix embl submission option · 59ed6b28
  tcarver authored 11 years ago
  
  59ed6b28
Nov 12, 2013
- fix for copying between entries and fix for showing features when · 7c3b5b5a
  tcarver authored 11 years ago
  
  concatenating the contigs
  7c3b5b5a
Nov 07, 2013
- update · 502162ab
  tcarver authored 11 years ago
  
  502162ab
- add more properties to processJnlpAttributes() · f5e26bc3
  tcarver authored 11 years ago
  
  f5e26bc3
- remove unused import · 37313fab
  tcarver authored 11 years ago
  
  37313fab
- update · 9870f780
  tcarver authored 11 years ago
  
  9870f780
Nov 05, 2013
- Merge pull request #166 from tcarver/master · dab98c15
  tcarver authored 11 years ago
  
  updates for test
  dab98c15
- updates for test · 657b45d4
  tcarver authored 11 years ago
  
  657b45d4
- Merge pull request #165 from tcarver/master · a0932712
  tcarver authored 11 years ago
  
  misc
  a0932712
- test for selenocysteine qualifier · b2a78f42
  tcarver authored 11 years ago
  
  b2a78f42
- update · 3aeae377
  tcarver authored 11 years ago
  
  3aeae377
- optionally remove product qualifier from CDS marked as a pseudogene · 38ce6003
  tcarver authored 11 years ago
  
  38ce6003
- optionally remove products from pseudogenes · f3c18d0c
  tcarver authored 11 years ago
  
  f3c18d0c
Nov 04, 2013
- use pseudogene=unknown as the qualifier for pseudogenic features · 818e10ff
  tcarver authored 11 years ago
  
  818e10ff
- project property tests · 8744c451
  tcarver authored 11 years ago
  
  8744c451

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